Pedigree Data Description

Warning

There are two pedigrees available for GMS rare disease referrals, one in the referral data section and the other in the interpretation request section of a response.

The pedigree in the referral data section is the information inputted at the test order stage The pedigree in the interpretation request section is the pedigree outputted from the bioinformatics pipeline

They can contain different information e.g. the sample IDs are only in the pedigree of the interpretation request

Field name	Data type	Value description
versionControl	VersionControl	Always null
LDPCode	string	Always null
familyId	string	Human readable referral ID (e.g. r1234567890)
members	array	List of members of a pedigree. See PedigreeMember. UPDATE: In GelReportModels release 7.7 (part of Anna NGIS release) labSampleId part of participant (v1.3.0) in the array of GermlineSamples is now a String, previously and integer
analysisPanels	array	Always null in referral pedigree. Can be found in ReferralTest > analysisPanels (see above).
diseasePenetrances	array	Always null in referral pedigree. Can be found in ReferralTest > diseasePenetrances (see above).
readyForAnalysis	boolean	Flag indicating if a pedigree is ready for analysis
familyQCState	FamilyQCState	Only present for rare disease cases. See FamilyQCState for available options.

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Last update: 2022-10-25